Skip to main content
Log in

Early-season warning of soybean rust regional epidemics using El Niño Southern/Oscillation information

  • Published:
International Journal of Biometeorology Aims and scope Submit manuscript

Abstract

Soybean rust (SBR) is a disease of significant impact to Brazilian soybean production. Twenty-four locations in a major growing region in southern Brazil, where long-term (30 years) weather information was available, were selected to estimate the risk of SBR epidemics and identify potential predictors derived from El Niño 3.4 region. A rainfall-based model was used to predict SBR severity in an “epidemic development window” (the months of February and March for the studied region) in the time series. Twenty-eight daily simulations for each year-location (n = 720) were performed considering each day after 31 January as a hypothetical detection date (HDD) to estimate a severity index (SBRindex). The mean SBRindex in a single year was defined as the ‘growing season severity index’ (GSSI) for that year. A probabilistic risk assessment related GSSI and sea surface temperatures (SST) at the El Niño 3.4. region (here categorized as warm, cold or neutral phase) in October–November–December (OND) of the same growing season. Overall, the median GSSI across location-years was 34.5%. The risk of GSSI exceeding 60% was generally low and ranged from 0 to 20 percentage points, with the higher values found in the northern regions of the state when compared to the central-western. During a warm OND-SST phase, the probability of GSSI exceeding its overall mean (locations pooled) increased significantly by around 25 percentage points compared to neutral and cold SST phases, especially over the central western region. This study demonstrates the potential to use El Niño/Southern Oscillation information to anticipate the risk of SBR epidemics up to 1 month in advance at a regional scale.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3
Fig. 4
Fig. 5
Fig. 6

Similar content being viewed by others

References

  • Baethgen WE, Magrin GO (2001) Applications of climate forecasts in the agricultural sector of south east South America. In: Sivakumar MVK (ed) Climate prediction and agriculture. International START Secretariat, Washington DC, pp 248–266

    Google Scholar 

  • Barros V, Gonzalez M, Liebmann B, Camilloni I (2000) Influence of the South Atlantic Convergence Zone and South Atlantic sea surface temperatures on interannual summer rainfall variability in southeastern South America. Theor Appl Climatol 67:123–133

    Article  Google Scholar 

  • Berlato MA, Fontana DC (1999) Variabilidade interanual da precipitação pluvial e rendimento da soja no Estado do Rio Grande do Sul. Braz Rev Bras Agrometeorol 7:119–125

    Google Scholar 

  • Berlato MA, Farenzena H, Fontana DC (2005) Associação entre El Niño Oscilação Sul e a produtividade do milho no estado do Rio Grande do Sul. Pesqui Agropecu Bras 40:423–432

    Google Scholar 

  • Christiano RSC, Scherm H (2007) Quantitative aspects of the spread of Asian soybean rust in the southeastern United States, 2005 to 2006. Phytopatholgy 97:1428–1433

    Article  CAS  Google Scholar 

  • Coelho CAS, Uvo CB, Ambrizzi T (2002) Exploring the impacts of the tropical Pacific SST on the precipitation patterns over South America during ENSO periods. Theor Appl Climatol 71:185–197

    Article  Google Scholar 

  • Costamilan LM, Bertagnolli PF, Yorinori, PT (2002) Avaliação de danos em soja causados por ferrugem asiática. In: Reunião de pesquisa de soja da Região Sul, 30 http://www.cnpt.embrapa.br/biblio/p_do12_15.htm. Accessed 25 October 2009

  • Costamilan LM, Ferreira PEP (2009) Levantamento de perdas causadas pela ferrugem asiática no Rio Grande do Sul, na safra 2008/09. In: Reunião do Consórcio Antiferrugem Safra 2008-09. Embrapa Soja, Documento 315, p 31

  • Del Ponte EM, Yang XB (2006) Estrategias de modelaje para la predicción y comunicación del riesgo de epidemias de la roya asiática de la soja. In: Popler LD (Org.). Roya Asiática de la Soja en América. El Libro. Las Talitas, Tucumán: Estación Experimental Agroindustrial "Obispo Colombres", pp 49–62

  • Del Ponte EM, Godoy CV, Li X, Yang XB (2006a) Predicting severity of Asian soybean rust with empirical rainfall models. Phytopathology 96:797–803

    Article  Google Scholar 

  • Del Ponte EM, Godoy CV, Canteri MG, Reis EM, Yang XB (2006b) Models and applications for risk assessment and prediction of Asian soybean rust epidemics. Braz Phytopathol 31:533–544

    Google Scholar 

  • Del Ponte EM, Esker PD (2008) Meteorological factors affecting Asian soybean rust epidemics—a systems approach and implications for risk assessment. Sci Agric 65:65–88

    Google Scholar 

  • Del Ponte EM, Fernandes JMC, Pavan W, Baethgen WE (2009) A model-based assessment of the impacts of climate variability on fusarium head blight seasonal risk in Southern Brazil. J Phytopathol 157:675–681

    Article  Google Scholar 

  • Diaz AF, Studzinski CD, Mechoso RC (1998) Relationship between precipitation anomalies in Uruguay and southern Brazil and sea surface temperature in the Pacific and Atlantic Oceans. J Clim 11:251–271

    Article  Google Scholar 

  • Fraisse CW, Cabrera VE, Breuer NE, Baez J, Quispe J, Matos E (2008) El Niño Southern Oscillation influences on soybean yields in eastern Paraguay. Int J Clim 28:1399–1407

    Article  Google Scholar 

  • Ferreyra RA, Podestá GP, Messina CD, Letson D, Dardanelli J, Guevara E, Meira S (2001) A linked-modeling framework to estimate maize production risk associated with ENSO-related climate variability in Argentina. Agric For Meteorol 107:177–192

    Article  Google Scholar 

  • Godoy CV, Flausino AM, Santos LCM, Del Ponte EM (2009) Eficiência do controle da ferrugem asiática da soja em função do momento de aplicação sob condições de epidemia em Londrina, PR. Trop Plant Pathol 34:56–61

    Article  Google Scholar 

  • Grimm AM, Tedeschi RG (2009) ENSO and extreme rainfall in South America. J Clim 22:1589–1609

    Article  Google Scholar 

  • IBGE (2010) Indicadores IBGE: Estatística da Produção Agrícola (abril de 2010). http://www.ibge.gov.br/home/estatistica/indicadores/agropecuaria/lspa/default.shtm. Accessed 27 April 2010

  • Isard SA, Russo JM, Ariatti A (2007) The Integrated Aerobiology Modeling System applied to the spread of soybean rust into the Ohio River valley during September 2006. Aerobiologia 23:271–282

    Article  Google Scholar 

  • Kayano M, Andreolli R (2007) Relations of South American summer rainfall interannual variations with the Pacific Decadal Oscillation. Int J Clim 27:531–540

    Article  Google Scholar 

  • Kumudini S, Godoy CV, Board JE, Omielan J, Tollenaar M (2008) Mechanisms involved in soybean rust-induced yield reduction. Crop Sci 48:2343–2350

    Article  Google Scholar 

  • Maia AHN, Meinke H (2006) From inferential statistics to climate knowledge. Adv Geosci 6:211–216

    Article  Google Scholar 

  • Maia AHN, Meinke H (2009) Probabilistic methods for seasonal forecasting in a changing climate: Cox-type regression models. Int J Clim. doi:10.1002/joc.2042

    Google Scholar 

  • Maia AHN, Meinke H, Lennox S, Stone R (2007) Inferential, nonparametric statistics to assess the quality of probabilistic forecast systems. Mon Weather Rev 135:351–362

    Article  Google Scholar 

  • Mantel N (1966) Evaluation of survival data and two new rank order statistics arising in its consideration. Cancer Chemother Rep 50:163–170

    CAS  Google Scholar 

  • McKeon GM, Hall WB, Crimp SJ, Howden SM, Stone RC, Jones DA (1998) Climate change in Queensland’s grazing lands. I. Approaches and climatic trends. Rangeland J 20:151–176

    Article  Google Scholar 

  • Meinke H, Hammer GL (1997) Forecasting regional crop production using SOI phases: a case study for the Australian peanut industry. Aust J Agric Res 48(6):789–793

    Article  Google Scholar 

  • Meinke H, Ryley MJ (1997) Effects of sorghum ergot on grain sorghum production: a preliminary climatic analysis. Aust J Agric Res 48(8):1241–1247

    Article  Google Scholar 

  • Melo RW, Fontana DC, Berlato MA (2004) Indicadores de produção de soja no Rio Grande do Sul comparados ao zoneamento agrícola. Pesqui Agropecu Bras 39:1167–1175

    Google Scholar 

  • Mota FS (2000) Influência dos fenômenos El Niño e La Niña sobre o rendimento do arroz irrigado na região de Pelotas (RS). Rev Bras Meteorol 15:21–24

    Google Scholar 

  • NOAA (2009) Monthly Atmospheric & SST Indices. http://www.cpc.noaa.gov/data/indices/sstoi.indices. Accessed 6 July 2009

  • Paegle JM, Mo KC (2002) Linkages between Summer Rainfall Variability over South America and Sea Surface Temperature Anomalies. J Clim 15:1389–1407

    Article  Google Scholar 

  • Pivonia S, Yang XB (2004) Assessment of potential year round establishment of soybean rust throughout the world. Plant Dis 88:523–529

    Article  Google Scholar 

  • Ropelewski CF, Halpert MS (1987) Global and regional scale precipitation patterns associated with the El Niño/Southern Oscilation. Mon Weather Rev 115:1606–1626

    Article  Google Scholar 

  • SAS (2004a) SAS/STAT user's guide, version 9.1, v.1-7. SAS Institute Inc, Cary, NC

  • SAS (2004b) SAS/GRAPH software: reference, version 8. SAS Institute Inc, Cary, NC, pp 801–858

  • Scherm H, Yang XB (1995) Interannual variations in wheat rust development in China and the United States in relation to the El Niño/ Southern Oscillation. Phytopathology 85:970–976

    Article  Google Scholar 

  • Scherm H, Christiano RSC, Esker P, Del Ponte EM, Godoy CV (2009) Quantitative review of fungicide efficacy trials for managing soybean rust in Brazil. Crop Prot 28:774–782

    Article  CAS  Google Scholar 

  • Sinclair JB, Hartman GL (1999) Soybean diseases. In: Hartman GL, Sinclair JB, Rupe JC (eds) Compendium of soybean diseases, 4 edn. Am Phytopathol Soc, St. Paul, pp 3–4

  • Spolti P, Godoy CV, Del Ponte EM (2009) Sumário da dispersão em larga escala das epidemias de ferrugem asiática da soja no Brasil em quatro safras (2005/06 a 2008/09). Embrapa Soja, Documento 317, pp 11–19

  • Stone RC, Hammer GL, Marcussen T (1996) Prediction of global rainfall probabilities using phases of Southern Oscillation Index. Nature 384:252–255

    Article  CAS  Google Scholar 

  • Stone RC, Smith I, McIntosh P (2000) Statistical methods for deriving seasonal climate forecasts from GCM’s. In: Hammer GL, Nichols N, Mitchell C (eds) Applications of seasonal climate forecasting in agricultural and natural ecosystems. Kluwer, Dordrecht, pp 135–147

  • Wang E, Ryley M, Meinke R (2003) Effect of climate variability on event frequency of sorghum ergot in Australia. Aust J Agric Res 54:599–611

    Article  Google Scholar 

  • Yang XB (2006) Framework development in plant disease risk assessment and its application. Eur J Plant Pathol 115:25–34

    Article  Google Scholar 

  • Yang XB, Scherm H (1997) El Niño and infectious disease. Science 275(5301):737–741

    Article  Google Scholar 

  • Yang XB, Tschanz AT, Dowler WM, Wang TC (1991) Development of yield loss models in relation to reductions of components of soybean infected with Phakopsora pachyrhizi. Phytopathology 81:1420–1426

    Article  Google Scholar 

  • Yorinori JT, Paiva WM, Frederick RD, Costamilan LM, Bertagnolli PF, Hartman GE, Godoy CV, Nunes J (2005) Epidemics of soybean rust (Phakopsora pachyrhizi) in Brazil and Paraguay from 2001 to 2003. Plant Dis 89:675–677

    Article  Google Scholar 

  • Zhao S, Yao C (1989) On the sea temperature prediction models of the prevailing level of wheat scab. Acta Phytopathol Sin 19:229–234

    Google Scholar 

Download references

Acknowledgments

The authors thank Holger Meinke (Centre for Crop Systems Analysis, Wageningen University) for a critical review of the manuscript. This research was funded by Conselho Nacional de Desenvolvimento Científico e Tecnológico - CNPq (Edital CNPq/MAPA/SDA Nº 064/2008).

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Emerson M. Del Ponte.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Del Ponte, E.M., Maia, A.H.N., dos Santos, T.V. et al. Early-season warning of soybean rust regional epidemics using El Niño Southern/Oscillation information. Int J Biometeorol 55, 575–583 (2011). https://doi.org/10.1007/s00484-010-0365-6

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00484-010-0365-6

Keywords

Navigation