Extra-slow-growing Tardiphaga strains isolated from nodules of Vavilovia formosa (Stev.) Fed.
- Author
- Vera I Safronova, Irina G Kuznetsova, Anna L Sazanova, Anastasiia K Kimeklis, Andrey A Belimov, Evgeny E Andronov, Alexander G Pinaev, Andrey R Pukhaev, Konstantin P Popov, Janna A Akopian, Anne Willems (UGent) and Igor A Tikhonovich
- Organization
- Project
-
- BRIO (Multiscale Analysis and Design for Process Intensification and Innovation)
- Abstract
- Eleven extra-slow-growing strains were isolated from nodules of the relict legume Vavilovia formosa growing in North Ossetia (Caucasus) and Armenia. All isolates formed a single rrs cluster together with the type strain Tardiphaga robiniae LMG 26467(T), while the sequencing of the 16S-23S rDNA intergenic region (ITS) and housekeeping genes glnII, atpD, dnaK, gyrB, recA and rpoB divided them into three groups. North Ossetian isolates (in contrast to the Armenian ones) were clustered separately from the type strain LMG 26467(T). However, all isolates were classified as T. robiniae because the DNA-DNA relatedness between them and the type strain LMG 26467(T) was 69.6 % minimum. Two symbiosis-related genes (nodM and nodT) were amplified in all isolated Tardiphaga strains. It was shown that the nodM gene phylogeny is similar to that of ITS and housekeeping genes. The presence of the other symbiosis-related genes in described Tardiphaga strains, which is recently described genus of rhizobia, as well as their ability to form nodules on any plants are under investigation.
- Keywords
- Housekeeping genes, nodM and nodT symbiosis-related genes, Relict legumes, Root nodule bacteria, SP NOV., PHOTOSYNTHETIC BRADYRHIZOBIA, GENES, NODULATION, SYMBIOSIS, LEGUMES, AESCHYNOMENE, BACTERIA, FAMILY, GENUS
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Citation
Please use this url to cite or link to this publication: http://hdl.handle.net/1854/LU-6975074
- MLA
- Safronova, Vera I., et al. “Extra-Slow-Growing Tardiphaga Strains Isolated from Nodules of Vavilovia Formosa (Stev.) Fed.” ARCHIVES OF MICROBIOLOGY, vol. 197, no. 7, 2015, pp. 889–98, doi:10.1007/s00203-015-1122-3.
- APA
- Safronova, V. I., Kuznetsova, I. G., Sazanova, A. L., Kimeklis, A. K., Belimov, A. A., Andronov, E. E., … Tikhonovich, I. A. (2015). Extra-slow-growing Tardiphaga strains isolated from nodules of Vavilovia formosa (Stev.) Fed. ARCHIVES OF MICROBIOLOGY, 197(7), 889–898. https://doi.org/10.1007/s00203-015-1122-3
- Chicago author-date
- Safronova, Vera I, Irina G Kuznetsova, Anna L Sazanova, Anastasiia K Kimeklis, Andrey A Belimov, Evgeny E Andronov, Alexander G Pinaev, et al. 2015. “Extra-Slow-Growing Tardiphaga Strains Isolated from Nodules of Vavilovia Formosa (Stev.) Fed.” ARCHIVES OF MICROBIOLOGY 197 (7): 889–98. https://doi.org/10.1007/s00203-015-1122-3.
- Chicago author-date (all authors)
- Safronova, Vera I, Irina G Kuznetsova, Anna L Sazanova, Anastasiia K Kimeklis, Andrey A Belimov, Evgeny E Andronov, Alexander G Pinaev, Andrey R Pukhaev, Konstantin P Popov, Janna A Akopian, Anne Willems, and Igor A Tikhonovich. 2015. “Extra-Slow-Growing Tardiphaga Strains Isolated from Nodules of Vavilovia Formosa (Stev.) Fed.” ARCHIVES OF MICROBIOLOGY 197 (7): 889–898. doi:10.1007/s00203-015-1122-3.
- Vancouver
- 1.Safronova VI, Kuznetsova IG, Sazanova AL, Kimeklis AK, Belimov AA, Andronov EE, et al. Extra-slow-growing Tardiphaga strains isolated from nodules of Vavilovia formosa (Stev.) Fed. ARCHIVES OF MICROBIOLOGY. 2015;197(7):889–98.
- IEEE
- [1]V. I. Safronova et al., “Extra-slow-growing Tardiphaga strains isolated from nodules of Vavilovia formosa (Stev.) Fed.,” ARCHIVES OF MICROBIOLOGY, vol. 197, no. 7, pp. 889–898, 2015.
@article{6975074,
abstract = {{Eleven extra-slow-growing strains were isolated from nodules of the relict legume Vavilovia formosa growing in North Ossetia (Caucasus) and Armenia. All isolates formed a single rrs cluster together with the type strain Tardiphaga robiniae LMG 26467(T), while the sequencing of the 16S-23S rDNA intergenic region (ITS) and housekeeping genes glnII, atpD, dnaK, gyrB, recA and rpoB divided them into three groups. North Ossetian isolates (in contrast to the Armenian ones) were clustered separately from the type strain LMG 26467(T). However, all isolates were classified as T. robiniae because the DNA-DNA relatedness between them and the type strain LMG 26467(T) was 69.6 % minimum. Two symbiosis-related genes (nodM and nodT) were amplified in all isolated Tardiphaga strains. It was shown that the nodM gene phylogeny is similar to that of ITS and housekeeping genes. The presence of the other symbiosis-related genes in described Tardiphaga strains, which is recently described genus of rhizobia, as well as their ability to form nodules on any plants are under investigation.}},
author = {{Safronova, Vera I and Kuznetsova, Irina G and Sazanova, Anna L and Kimeklis, Anastasiia K and Belimov, Andrey A and Andronov, Evgeny E and Pinaev, Alexander G and Pukhaev, Andrey R and Popov, Konstantin P and Akopian, Janna A and Willems, Anne and Tikhonovich, Igor A}},
issn = {{0302-8933}},
journal = {{ARCHIVES OF MICROBIOLOGY}},
keywords = {{Housekeeping genes,nodM and nodT symbiosis-related genes,Relict legumes,Root nodule bacteria,SP NOV.,PHOTOSYNTHETIC BRADYRHIZOBIA,GENES,NODULATION,SYMBIOSIS,LEGUMES,AESCHYNOMENE,BACTERIA,FAMILY,GENUS}},
language = {{eng}},
number = {{7}},
pages = {{889--898}},
title = {{Extra-slow-growing Tardiphaga strains isolated from nodules of Vavilovia formosa (Stev.) Fed.}},
url = {{http://doi.org/10.1007/s00203-015-1122-3}},
volume = {{197}},
year = {{2015}},
}
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