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Rapid and sensitive method for determining free amino acids in plant tissue by high-performance liquid chromatography with fluorescence detection

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Abstract

This paper describes a reliable and rapid method for the complete separation and quantitation of twenty-five amino acids typically found in plants, based on reversed phase high-performance liquid chromatography–linked fluorescence detector using a 150 × 4.6 mm Zorbax Eclipse AAA column. Plant tissue free amino acids (FAA) were extracted by ultrasonication with 5% (v/v) aqueous trifluoroacetic acid followed by ultrafiltration of extracts. The following analysis of amino acids was performed through programmed precolumn derivatization with ortho-phthalaldehyde and 9-fluorenylmethyl chloroformate reagents and efficient elution of derivatives within 26 min using binary gradient scheme. The method was validated over a concentration range of 4.5–450 μmol L−1 (μM). Separation analysis showed good selectivity (resolution > 1.5) for most amino acids. The average repeatability (RSD%, relative standard deviation) of the analysis at seven calibration concentrations was below 4% and ranged from 1.13% to 12.04%. The intra-day mean coefficient of variation at two concentrations (22.5 and 90 μM) was within 2%, and the intermediate precision was less than 4%. The limits of detection were between 0.012 and 6.68 μM. The coefficients of determination (R2) of the linear calibration curves were from 0.9989 to 0.9999. When the method was applied to plant samples, the FAA recoveries at two spiked levels (25 and 100 μM) ranged from 67.0% to 108.9% with an average of 94.4%, and the precision was 0.26%–12.31% RSD. A specific application combining this method with optimized extraction and interference removal procedures was successfully used to determine the FAA pools in different plant tissues. Finally, a PLS-DA multivariate statistics model was validated for the classification of three plant species according to their FAA profiles.

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References

  • Álvarez-Sánchez B, Priego-Capote F, de Castro ML (2010) Metabolomics analysis II. Preparation of biological samples prior to detection. TrAC Trends Anal Chem 29:120–127

    Article  Google Scholar 

  • Amelung W, Zhang X (2001) Determination of amino acid enantiomers in soils. Soil Biol Biochem 33:553–562

    Article  Google Scholar 

  • Analytical Methods Committee (1994) Is my calibration linear? Analyst 119:2363–2366

    Article  Google Scholar 

  • Barker M, Rayens W (2003) Partial least squares for discrimination. J Chemom 17:166–173

    Article  Google Scholar 

  • Beckonert O, Keun HC, Ebbels TM, Bundy J, Holmes E, Lindon JC, Nicholson JK (2007) Metabolic profiling, metabolomic and metabonomic procedures for NMR spectroscopy of urine, plasma, serum and tissue extracts. Nat Protoc 2:2692–2703

    Article  Google Scholar 

  • Berg RA, Hoefsloot HC, Westerhuis JA, Smilde AK, Werf MJ (2006) Centering, scaling, and transformations: improving the biological information content of metabolomics data. BMC Genomics 7:1

    Article  Google Scholar 

  • Bhatty R (1972) A note on trichloroacetic acid precipitation of oilseed proteins. Cereal Chem 49:I0

    Google Scholar 

  • Bhatty R, Finlayson A (1973) Extraction of nonprotein nitrogen from oilseed meals with different solvents. Cereal Chem 50:329–336

    Google Scholar 

  • Bidlingmeyer BA, Cohen SA, Tarvin TL (1984) Rapid analysis of amino acids using pre-column derivatization. J Chromatogr B Biomed Sci Appl 336:93–104

    Article  Google Scholar 

  • Blanchard J (1981) Evaluation of the relative efficacy of various techniques for deproteinizing plasma samples prior to high-performance liquid chromatographic analysis. J Chromatogr B Biomed Sci Appl 226:455–460

    Article  Google Scholar 

  • Bouché N, Fromm H (2004) GABA in plants: just a metabolite? Trends Plant Sci 3:110–115

    Article  Google Scholar 

  • Brereton RG (2009) Chemometrics for pattern recognition, chapter 8. Wiley, New York, pp 117–118

    Book  Google Scholar 

  • Brereton RG, Lloyd GR (2014) Partial least squares discriminant analysis: taking the magic away. J Chemom 28:213–225

    Article  Google Scholar 

  • Calanni J, Berg E, Wood M, Mangis D, Boyce R, Weathers W, Sievering H (1999) Atmospheric nitrogen deposition at a conifer forest: response of free amino acids in Engelmann spruce needles. Environ Pollut 105:79–89

    Article  Google Scholar 

  • Chaimbault P, Petritis K, Elfakir C, Dreux M (1999) Determination of 20 underivatized proteinic amino acids by ion-pairing chromatography and pneumatically assisted electrospray mass spectrometry. J Chromatogr A 855:191–202

    Article  Google Scholar 

  • Choi BK, Hercules DM, Gusev AI (2001) Effect of liquid chromatography separation of complex matrices on liquid chromatography–tandem mass spectrometry signal suppression. J Chromatogr A 907:337–342

    Article  Google Scholar 

  • Cohen SA, Michaud DP (1993) Synthesis of a fluorescent derivatizing reagent, 6-aminoquinolyl-N-hydroxysuccinimidyl carbamate, and its application for the analysis of hydrolysate amino acids via high-performance liquid chromatography. Anal Biochem 211:279–287

    Article  Google Scholar 

  • Cooper C, Packer N, Williams K (2001) Amino acid analysis protocol, chapters 1, 2 and 10, vol 159. Springer, Berlin

    Google Scholar 

  • Craig A, Cloarec O, Holmes E, Nicholson JK, Lindon JC (2006) Scaling and normalization effects in NMR spectroscopic metabonomic data sets. Anal Chem 78:2262–2267

    Article  Google Scholar 

  • Cuadros Rodríguez L, García Campaña A, Bosque Sendra J (1996) Statistical estimation of linear calibration range. Anal Lett 29:1231–1239

    Article  Google Scholar 

  • De Jong C, Hughes GJ, Van Wieringen E, Wilson KJ (1982) Amino acid analyses by high-performance liquid chromatography: an evaluation of the usefulness of pre-column Dns derivatization. J Chromatogr A 241:345–359

    Article  Google Scholar 

  • Dettmer K, Aronov PA, Hammock BD (2007) Mass spectrometry-based metabolomics. Mass Spectrom Rev 26:51–78

    Article  Google Scholar 

  • Divino Filho J, Barany P, Stehle P, Fürst P, Bergström J (1997) Free amino-acid levels simultaneously collected in plasma, muscle, and erythrocytes of uraemic patients. Nephrol Dial Transplant 12:2339–2348

    Article  Google Scholar 

  • Dupont DR, Keim PS, Chui AH, Bello R, Bozzini M, Wilson KJ (1989) A comprehensive approach to amino acid analysis. In: Hugli TE (ed) Techniques in protein chemistry. Academic Press, pp 284–294

  • Einarsson S, Josefsson B, Lagerkvist S (1983) Determination of amino acids with 9-fluorenylmethyl chloroformate and reversed-phase high-performance liquid chromatography. J Chromatogr A 282:609–618

    Article  Google Scholar 

  • Fábián V, Morvai M, Pintér-Szakács M, Molnár-Perl I (1991) Standardization of cation-exchange clean-up prior to gas chromatography of amino acids. J Chromatogr A 553:87–92

    Article  Google Scholar 

  • Ferri C, Hernández-Orallo J, Modroiu R (2009) An experimental comparison of performance measures for classification. Pattern Recogn Lett 30:27–38

    Article  Google Scholar 

  • Filzmoser P, Liebmann B, Varmuza K (2009) Repeated double cross validation. J Chemom 23:160–171

    Article  Google Scholar 

  • Fritz C, Mueller C, Matt P, Feil R, Stitt M (2006) Impact of the C–N status on the amino acid profile in tobacco source leaves. Plant Cell Environ 29:2055–2076

    Article  Google Scholar 

  • Fürst P, Pollack L, Graser T, Godel H, Stehle P (1990) Appraisal of four pre-column derivatization methods for the high-performance liquid chromatographic determination of free amino acids in biological materials. J Chromatogr A 499:557–569

    Article  Google Scholar 

  • Gidman EA et al (2005) Metabolic fingerprinting for bio-indication of nitrogen responses in Calluna vulgaris heath communities. Metabolomics 1:279–285

    Article  Google Scholar 

  • Gromski PS, Xu Y, Hollywood KA, Turner ML, Goodacre R (2015) The influence of scaling metabolomics data on model classification accuracy. Metabolomics 11:684–695

    Article  Google Scholar 

  • Heems D, Luck G, Fraudeau C, Verette E (1998) Fully automated precolumn derivatization, on-line dialysis and high-performance liquid chromatographic analysis of amino acids in food, beverages and feedstuff. J Chromatogr A 798:9–17

    Article  Google Scholar 

  • Henderson J, Ricker R, Bidlingmeyer B, Woodward C (2000) Rapid, accurate, sensitive, and reproducible HPLC analysis of amino acids. Agilent Technologies. Technical Note 5980-1193E. J R Soc

  • Hermosín I, Chicón RM, Cabezudo MD (2003) Free amino acid composition and botanical origin of honey. Food Chem 83:263–268

    Article  Google Scholar 

  • Hesterberg T, Moore DS, Monaghan S, Clipson A, Epstein R (2005) Bootstrap methods and permutation tests. Introduc Pract Stat 5:1–70

    Google Scholar 

  • Hibbert DB, Gooding JJ (2005) Data analysis for chemistry, chapter 5. Oxford University Press, Oxford

    Google Scholar 

  • Hill DW, Walters FH, Wilson TD, Stuart JD (1979) High performance liquid chromatographic determination of amino acids in the picomole range. Anal Chem 51:1338–1341

    Article  Google Scholar 

  • Huhn G, Schulz H (1996) Contents of free amino acids in Scots pine needles from field sites with different levels of nitrogen deposition. New Phytol 134:95–101

    Article  Google Scholar 

  • Huie CW (2002) A review of modern sample-preparation techniques for the extraction and analysis of medicinal plants. Anal Bioanal Chem 373:23–30

    Article  Google Scholar 

  • Hyötyläinen T (2009) Critical evaluation of sample pretreatment techniques. Anal Bioanal Chem 394:743–758

    Article  Google Scholar 

  • Jones BN, Gilligan JP (1983) o-Phthaldialdehyde precolumn derivatization and reversed-phase high-performance liquid chromatography of polypeptide hydrolysates and physiological fluids. J Chromatogr A 266:471–482

    Article  Google Scholar 

  • Jones BN, Pääbo S, Stein S (1981) Amino acid analysis and enzymatic sequence determination of peptides by an improved o-phthaldialdehyde precolumn labeling procedure. J Liq Chromatogr 4:565–586

    Article  Google Scholar 

  • Jones OA, Spurgeon DJ, Svendsen C, Griffin JL (2008) A metabolomics based approach to assessing the toxicity of the polyaromatic hydrocarbon pyrene to the earthworm Lumbricus rubellus. Chemosphere 71:601–609

    Article  Google Scholar 

  • Kim HK, Verpoorte R (2010) Sample preparation for plant metabolomics. Phytochem Anal 21:4–13

    Article  Google Scholar 

  • Kuhn M, Johnson K (2013) Applied predictive modeling, vol 26. Springer, Berlin, p 236

    Book  Google Scholar 

  • Labadarios D, Moodie I, Shephard G (1984) Gas chromatographic analysis of amino acids in physiological fluids: a critique. J Chromatogr B Biomed Sci Appl 310:223–231

    Article  Google Scholar 

  • Lin CY, Wu H, Tjeerdema RS, Viant MR (2007) Evaluation of metabolite extraction strategies from tissue samples using NMR metabolomics. Metabolomics 3:55–67

    Article  Google Scholar 

  • Liu X-Y, Xiao H-Y, Liu C-Q, Li Y-Y, Xiao H-W (2008) Stable carbon and nitrogen isotopes of the moss Haplocladium microphyllum in an urban and a background area (SW China): the role of environmental conditions and atmospheric nitrogen deposition. Atmos Environ 42:5413–5423

    Article  Google Scholar 

  • Liu X-Y, Koba K, Liu C-Q, Li X-D, Yoh M (2012) Pitfalls and new mechanisms in moss isotope biomonitoring of atmospheric nitrogen deposition. Environ Sci Technol 46:12557–12566

    Article  Google Scholar 

  • Lloyd GR, Ahmad S, Wasim M, Brereton RG (2009) Pattern recognition of inductively coupled plasma atomic emission spectroscopy of human scalp hair for discriminating between healthy and hepatitis C patients. Anal Chim Acta 649:33–42

    Article  Google Scholar 

  • Magnusson B (2014) The fitness for purpose of analytical methods: a laboratory guide to method validation and related topics (2014), 2nd edn. Eurachem, London, pp 30–33

    Google Scholar 

  • Mandrioli R, Mercolini L, Raggi MA (2013) Recent trends in the analysis of amino acids in fruits and derived foodstuffs. Anal Bioanal Chem 405:7941–7956

    Article  Google Scholar 

  • Meyer H (1957) The ninhydrin reaction and its analytical applications. Biochem J 67:333

    Article  Google Scholar 

  • Mohabbat T, Drew B (2008) Simultaneous determination of 33 amino acids and dipeptides in spent cell culture media by gas chromatography-flame ionization detection following liquid and solid phase extraction. J Chromatogr B 862:86–92

    Article  Google Scholar 

  • Molero G, Aranjuelo I, Teixidor P, Araus JL, Nogués S (2011) Measurement of 13C and 15N isotope labeling by gas chromatography/combustion/isotope ratio mass spectrometry to study amino acid fluxes in a plant–microbe symbiotic association. Rapid Commun Mass Spectrom 25:599–607

    Article  Google Scholar 

  • Molero G, Tcherkez G, Araus JL, Nogués S, Aranjuelo I (2014) On the relationship between C and N fixation and amino acid synthesis in nodulated alfalfa (Medicago sativa). Funct Plant Biol 41:331–341

    Article  Google Scholar 

  • Mushtaq MY, Choi YH, Verpoorte R, Wilson EG (2014) Extraction for metabolomics: access to the metabolome. Phytochem Anal 25:291–306

    Article  Google Scholar 

  • Mustafa A, Åman P, Andersson R, Kamal-Eldin A (2007) Analysis of free amino acids in cereal products. Food Chem 105:317–324

    Article  Google Scholar 

  • Noctor G, Bergot G, Mauve C, Thominet D, Lelarge-Trouverie C, Prioul J-L (2007) A comparative study of amino acid measurement in leaf extracts by gas chromatography-time of flight-mass spectrometry and high performance liquid chromatography with fluorescence detection. Metabolomics 3:161–174

    Article  Google Scholar 

  • Obata T, Fernie AR (2012) The use of metabolomics to dissect plant responses to abiotic stresses. Cell Mol Life Sci CMLS 69:3225–3243. doi:10.1007/s00018-012-1091-5

    Article  Google Scholar 

  • Orata F (2012) Derivatization reactions and reagents for gas chromatography analysis. In: Mohd MA (ed) Advanced gas chromatography—progress in agricultural, biomedical and industrial applications. INTECH Open Access Publisher, Rijeka, pp 83–108

    Google Scholar 

  • Pérez-Castaño E et al (2015) Comparison of different analytical classification scenarios: application for the geographical origin of edible palm oil by sterolic (NP) HPLC fingerprinting. Anal Methods 7:4192–4201

    Article  Google Scholar 

  • Pérez-Palacios T, Melo A, Cunha S, Ferreira I (2014) Determination of free amino acids in coated foods by GC–MS: optimization of the extraction procedure by using statistical design. Food Anal Methods 7:172–180

    Article  Google Scholar 

  • Persson J, Näsholm T (2001) A GC–MS method for determination of amino acid uptake by plants. Physiol Plant 113:352–358

    Article  Google Scholar 

  • Pesarin F, Salmaso L (2010) Permutation tests for complex data: theory, applications and software. Wiley, New York

    Book  Google Scholar 

  • Prichard E, Barwick V (2007) Quality assurance in analytical chemistry, chapters 2 and 4, vol 25. Wiley, New York

    Book  Google Scholar 

  • R Core Team (2016) R: a language and environment for statistical computing. https://www.R-project.org/, Vienna, Austria

  • Rajalingam D, Loftis C, Xu JJ, Kumar TKS (2009) Trichloroacetic acid-induced protein precipitation involves the reversible association of a stable partially structured intermediate. Prot Sci 18:980–993

    Article  Google Scholar 

  • Roth M (1971) Fluorescence reaction for amino acids. Anal Chem 43:880–882

    Article  Google Scholar 

  • Schuster R (1988) Determination of amino acids in biological, pharmaceutical, plant and food samples by automated precolumn derivatization and high-performance liquid chromatography. J Chromatogr B Biomed Sci Appl 431:271–284

    Article  Google Scholar 

  • Schwarz EL, Roberts WL, Pasquali M (2005) Analysis of plasma amino acids by HPLC with photodiode array and fluorescence detection. Clin Chim Acta 354:83–90

    Article  Google Scholar 

  • Shimbo K, Oonuki T, Yahashi A, Hirayama K, Miyano H (2009) Precolumn derivatization reagents for high-speed analysis of amines and amino acids in biological fluid using liquid chromatography/electrospray ionization tandem mass spectrometry. Rapid Commun Mass Spectrom 23:1483–1492

    Article  Google Scholar 

  • Silva BM, Casal S, Andrade PB, Seabra RM, Oliveira MBP, Ferreira MA (2004) Free amino acid composition of quince (Cydonia oblonga Miller) fruit (pulp and peel) and jam. J Agric Food Chem 52:1201–1206

    Article  Google Scholar 

  • Sivaraman T, Kumar T, Jayaraman G, Yu C (1997) The mechanism of 2, 2, 2-trichloroacetic acid-induced protein precipitation. J Prot Chem 16:291–297

    Article  Google Scholar 

  • Sobolevsky TG, Revelsky AI, Miller B, Oriedo V, Chernetsova ES, Revelsky IA (2003) Comparison of silylation and esterification/acylation procedures in GC–MS analysis of amino acids. J Sep Sci 26:1474–1478

    Article  Google Scholar 

  • Szabados L, Savoure A (2010) Proline: a multifunctional amino acid. Trends Plant Sci 15:89–97

    Article  Google Scholar 

  • Tada K, Tada M, Maita Y (1998) Dissolved free amino acids in coastal seawater using a modified fluorometric method. J Oceanogr 54:313–321

    Article  Google Scholar 

  • Takano Y, Kashiyama Y, Ogawa NO, Chikaraishi Y, Ohkouchi N (2010) Isolation and desalting with cation-exchange chromatography for compound-specific nitrogen isotope analysis of amino acids: application to biogeochemical samples. Rapid Commun Mass Spectrom 24:2317–2323

    Article  Google Scholar 

  • Tapuhi Y, Schmidt DE, Lindner W, Karger BL (1981) Dansylation of amino acids for high-performance liquid chromatography analysis. Anal Biochem 115:123–129

    Article  Google Scholar 

  • Villas-Boas SG, Nielsen J, Smedsgaard J, Hansen MA, Roessner-Tunali U (2007) Metabolome analysis: an introduction, vol 24. Wiley, New York, p 68

    Book  Google Scholar 

  • Wang L, Xu R, Hu B, Li W, Sun Y, Tu Y, Zeng X (2010) Analysis of free amino acids in Chinese teas and flower of tea plant by high performance liquid chromatography combined with solid-phase extraction. Food Chem 123:1259–1266

    Article  Google Scholar 

  • Watanabe Y, Imai K (1983) Liquid chromatographic determination of amino and imino acids and thiols by postcolumn derivatization with 4-fluoro-7-nitrobenzo-2, 1, 3-oxadiazole. Anal Chem 55:1786–1791

    Article  Google Scholar 

  • Weckwerth W, Kahl G (2013) The handbook of plant metabolomics, chapters 1 and 8. Wiley, New York

    Book  Google Scholar 

  • Westerhuis JA et al (2008) Assessment of PLSDA cross validation. Metabolomics 4:81–89

    Article  Google Scholar 

  • Woo KL, Lee DS (1995) Capillary gas chromatographic determination of proteins and biological amino acids as N (O)-tert.-butyldimethylsilyl derivatives. J Chromatogr B Biomed Sci Appl 665:15–25

    Article  Google Scholar 

  • Woodward C, Henderson JW Jr, Wielgos T (2007) High-speed amino acid analysis (AAA) on 1.8 µm reversed-phase (RP) columns. Agilent Technologies, Wilmington

    Google Scholar 

  • Yang S, Smetena I (1993) Determination of free amino acids in tobacco by HPLC with fluorescence detection and precolumn derivatization. Chromatographia 37:593–598

    Article  Google Scholar 

  • Zhao M et al (2013) A high-performance liquid chromatographic method for simultaneous determination of 21 free amino acids in tea. Food Anal Methods 6:69–75

    Article  Google Scholar 

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Acknowledgements

This study was financially supported by the National Key Research and Development Program of China through Grant 2016YFA0601000 (H.Y. Xiao) and National Natural Science Foundation of China through Grants 41425014, 41273027 and 41173027 (H.Y. Xiao), and by the National Basic Research Program of China through Grants 2013CB956703 (H.Y. Xiao).

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Zheng, N., Xiao, H., Zhang, Z. et al. Rapid and sensitive method for determining free amino acids in plant tissue by high-performance liquid chromatography with fluorescence detection. Acta Geochim 36, 680–696 (2017). https://doi.org/10.1007/s11631-017-0244-5

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