English
 
Help Privacy Policy Disclaimer
  Advanced SearchBrowse

Item

ITEM ACTIONSEXPORT

Released

Journal Article

Carbohydrates and carbohydrate degradation gene abundance and transcription in Atlantic waters of the Arctic

MPS-Authors
/persons/resource/persons256939

Vidal-Melgosa,  Silvia
University Bremen - MPI Joint Research Group for Marine Glycobiology, Max Planck Institute for Marine Microbiology, Max Planck Society;

/persons/resource/persons210443

Hehemann,  Jan-Hendrik
University Bremen - MPI Joint Research Group for Marine Glycobiology, Max Planck Institute for Marine Microbiology, Max Planck Society;

/persons/resource/persons210230

Amann,  Rudolf
Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society;

/persons/resource/persons210389

Fuchs,  Bernhard M.
Department of Molecular Ecology, Max Planck Institute for Marine Microbiology, Max Planck Society;

External Resource
No external resources are shared
Fulltext (restricted access)
There are currently no full texts shared for your IP range.
Fulltext (public)

s43705-023-00324-7.pdf
(Publisher version), 3MB

Supplementary Material (public)
There is no public supplementary material available
Citation

Priest, T., Vidal-Melgosa, S., Hehemann, J.-H., Amann, R., & Fuchs, B. M. (2023). Carbohydrates and carbohydrate degradation gene abundance and transcription in Atlantic waters of the Arctic. ISME COMMUNICATIONS, 3(1): 130. doi:10.1038/s43705-023-00324-7.


Cite as: https://hdl.handle.net/21.11116/0000-000E-5EAB-9
Abstract
Carbohydrates are chemically and structurally diverse, represent a substantial fraction of marine organic matter and are key substrates for heterotrophic microbes. Studies on carbohydrate utilisation by marine microbes have been centred on phytoplankton blooms in temperate regions, while far less is known from high-latitude waters and during later seasonal stages. Here, we combine glycan microarrays and analytical chromatography with metagenomics and metatranscriptomics to show the spatial heterogeneity in glycan distribution and potential carbohydrate utilisation by microbes in Atlantic waters of the Arctic. The composition and abundance of monomers and glycan structures in POM varied with location and depth. Complex fucose-containing sulfated polysaccharides, known to accumulate in the ocean, were consistently detected, while the more labile beta-1,3-glucan exhibited a patchy distribution. Through 'omics analysis, we identify variations in the abundance and transcription of carbohydrate degradation-related genes across samples at the community and population level. The populations contributing the most to transcription were taxonomically related to those known as primary responders and key carbohydrate degraders in temperate ecosystems, such as NS4 Marine Group and Formosa. The unique transcription profiles for these populations suggest distinct substrate utilisation potentials, with predicted glycan targets corresponding to those structurally identified in POM from the same sampling sites. By combining cutting-edge technologies and protocols, we provide insights into the carbohydrate component of the carbon cycle in the Arctic during late summer and present a high-quality dataset that will be of great value for future comparative analyses.