Vanherberghen, Morgane ; Université de Liège - ULiège > Département clinique des animaux de compagnie et des équidés > Médecine interne des animaux de compagnie
Bureau, Fabrice ; Université de Liège - ULiège > Département de sciences fonctionnelles > GIGA-R : Biochimie et biologie moléculaire
Peters, Iain
Day, Michael
Clercx, Cécile ; Université de Liège - ULiège > Département clinique des animaux de compagnie et des équidés > Pathologie médicale des petits animaux
Peeters, Dominique ; Université de Liège - ULiège > Département clinique des animaux de compagnie et des équidés > Médecine interne des animaux de compagnie
Language :
English
Title :
Analysis of gene expression in canine sino-nasal aspergillosis and lymphoplasmacytic rhinitis: a transcriptomic analysis.
Billen F., Clercx C., Le Garerres A., Massart L., Mignon B., Peeters D. Effect of sampling method and incubation temperature on fungal culture in canine sinonasal aspergillosis. J. Small Anim. Pract. 2009, 50:67-72.
Chowdhury D., Lieberman J. Death by a thousand cuts: granzyme pathways of programmed cell death. Annu. Rev. Immunol. 2008, 26:389-420.
Gafa V., Remoli M.E., Giacomini E., Gagliardi M.C., Lande R., Severa M., Grillot R., Coccia E.M. In vitro infection of human dendritic cells by Aspergillus fumigatus conidia triggers the secretion of chemokines for neutrophil and Th1 lymphocyte recruitment. Microbes Infect. 2007, 9:971-980.
Hellemans J., Mortier G., De Paepe A., Speleman F., Vandesompele J. qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data. Genome Biol. 2007, 8:R19.
Huang d.W., Sherman B.T., Lempicki R.A. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 2009, 4:44-57.
Kaplan M.H., Sun Y.L., Hoey T., Grusby M.J. Impaired IL-12 responses and enhanced development of Th2 cells in Stat4-deficient mice. Nature 1996, 382:174-177.
Kaser A., Dunzendorfer S., Offner F.A., Ryan T., Schwabegger A., Cruikshank W.W., Wiedermann C.J., Tilg H. A role for IL-16 in the cross-talk between dendritic cells and T cells. J. Immunol. 1999, 163:3232-3238.
Kendziorski C.M., Zhang Y., Lan H., Attie A.D. The efficiency of pooling mRNA in microarray experiments. Biostatistics 2003, 4:465-477.
Lund R., Ahlfors H., Kainonen E., Lahesmaa A.M., Dixon C., Lahesmaa R. Identification of genes involved in the initiation of human Th1 or Th2 cell commitment. Eur. J. Immunol. 2005, 35:3307-3319.
Lynch E.A., Heijens C.A., Horst N.F., Center D.M., Cruikshank W.W. Cutting edge: IL-16/CD4 preferentially induces Th1 cell migration: requirement of CCR5. J. Immunol. 2003, 171:4965-4968.
McFadden C., Morgan R., Rahangdale S., Green D., Yamasaki H., Center D., Cruikshank W. Preferential migration of T regulatory cells induced by IL-16. J. Immunol. 2007, 179:6439-6445.
Nagai S., Hashimoto S., Yamashita T., Toyoda N., Satoh T., Suzuki T., Matsushima K. Comprehensive gene expression profile of human activated T(h)1- and T(h)2-polarized cells. Int. Immunol. 2001, 13:367-376.
Peeters D., Peters I.R., Clercx C., Day M.J. Quantification of mRNA encoding cytokines and chemokines in nasal biopsies from dogs with sino-nasal aspergillosis. Vet. Microbiol. 2006, 114:318-326.
Peeters D., Peters I.R., Farnir F., Clercx C., Day M.J. Real-time RT-PCR quantification of mRNA encoding cytokines and chemokines in histologically normal canine nasal, bronchial and pulmonary tissue. Vet. Immunol. Immunopathol. 2005, 104:195-204.
Peeters D., Peters I.R., Helps C.R., Gabriel A., Day M.J., Clercx C. Distinct tissue cytokine and chemokine mRNA expression in canine sino-nasal aspergillosis and idiopathic lymphoplasmacytic rhinitis. Vet. Immunol. Immunopathol. 2007, 117:95-105.
Peters I.R., Helps C.R., Batt R.M., Day M.J., Hall E.J. Quantitative real-time RT-PCR measurement of mRNA encoding alpha-chain, pIgR and J-chain from canine duodenal mucosa. J. Immunol. Methods 2003, 275:213-222.
Peters I.R., Peeters D., Helps C.R., Day M.J. Development and application of multiple internal reference (housekeeper) gene assays for accurate normalisation of canine gene expression studies. Vet. Immunol. Immunopathol. 2007, 117:55-66.
Rozen S., Skaletsky H. Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol. 2000, 132:365-386.
Sharp N.J.H., Harvey C.E., Sullivan M. Canine nasal aspergillosis and penicilliosis. Comp Cont Educ 1991, 13:41-47.
Szabo S.J., Kim S.T., Costa G.L., Zhang X., Fathman C.G., Glimcher L.H. A novel transcription factor, T-bet, directs Th1 lineage commitment. Cell 2000, 100:655-669.
Thierfelder W.E., van Deursen J.M., Yamamoto K., Tripp R.A., Sarawar S.R., Carson R.T., Sangster M.Y., Vignali D.A., Doherty P.C., Grosveld G.C., Ihle J.N. Requirement for Stat4 in interleukin-12-mediated responses of natural killer and T cells. Nature 1996, 382:171-174.
Umetsu S.E., Winandy S. Ikaros is a regulator of Il10 expression in CD4+ T cells. J. Immunol. 2009, 183:5518-5525.
Wang J.H., Nichogiannopoulou A., Wu L., Sun L., Sharpe A.H., Bigby M., Georgopoulos K. Selective defects in the development of the fetal and adult lymphoid system in mice with an Ikaros null mutation. Immunity 1996, 537-549.
Windsor R.C., Johnson L.R., Herrgesell E.J., De Cock H.E. Idiopathic lymphoplasmacytic rhinitis in dogs: 37 cases (1997-2002). J. Am. Vet. Med. Assoc. 2004, 224:1952-1957.
Windsor R.C., Johnson L.R., Sykes J.E., Drazenovich T.L., Leutenegger C.M., De Cock H.E. Molecular detection of microbes in nasal tissue of dogs with idiopathic lymphoplasmacytic rhinitis. J. Vet. Intern. Med. 2006, 20:250-256.
Zhang W., Carriquiry A., Nettleton D., Dekkers J.C. Pooling mRNA in microarray experiments and its effect on power. Bioinformatics 2007, 23:1217-1224.
