item 1 out of 1
- Author
-
M. Bause
- Title
- Maximum caliber approach to reweight dynamics of non-equilibrium steady states
- Supervisors
- Co-supervisors
- Award date
- 26 January 2021
- Number of pages
- 127
- Document type
- PhD thesis
- Faculty
- Faculty of Science (FNWI)
- Institute
- Informatics Institute (IVI)
Van 't Hoff Institute for Molecular Sciences (HIMS) - Abstract
-
Non-equilibrium steady states are of great interest for the study of photosynthesis, molecular motors, biological switches or driven systems in statistical physics. The aim of this thesis is to broaden the understanding of non-equilibrium steady states (NESS) in soft-matter systems and provide a framework for reweighting dynamical information between NESS. The method is applied to phenomenological single particle systems described in full configurational coordinates and a tetraalanine peptide described in system-specific collective variables. We avoid the combinatorial explosion of microtrajectories by systematically constructing pathways through Markovian transitions. The reweighting is based on the information theoretic approach of Jaynes' Maximum Caliber, connecting data drawn from simulation or experiment to system information in the form of constraints. It is shown that local entropy production constraints define a NESS by controlling dissipation of a system on a local level. Non-dissipative contributions to the dynamics are drawn from the reference data and are shown to define an invariant quantity under reweighting. The presented reweighting method demonstrates the potential of the Maximum Caliber to understand and analyse systems off-equilibrium.
- Persistent Identifier
- https://hdl.handle.net/11245.1/36ea6f03-3264-4544-827b-0b1fe2c86da0
- Downloads
Disclaimer/Complaints regulations
If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library, or send a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible.